Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc27Q3V036 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc27Q3V036 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.05■□□□□ 0.8
Ccdc27Q3V036 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC20.05■□□□□ 0.8
Ccdc27Q3V036 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc27Q3V036 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc27Q3V036 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ccdc27Q3V036 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc27Q3V036 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc27Q3V036 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc27Q3V036 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Ccdc27Q3V036 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc27Q3V036 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc27Q3V036 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc27Q3V036 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc27Q3V036 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc27Q3V036 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccdc27Q3V036 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc27Q3V036 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc27Q3V036 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc27Q3V036 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc27Q3V036 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc27Q3V036 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccdc27Q3V036 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc27Q3V036 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ccdc27Q3V036 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc27Q3V036 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc27Q3V036 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc27Q3V036 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc27Q3V036 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc27Q3V036 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc27Q3V036 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc27Q3V036 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC20.03■□□□□ 0.8
Ccdc27Q3V036 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc27Q3V036 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc27Q3V036 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc27Q3V036 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Ccdc27Q3V036 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc27Q3V036 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc27Q3V036 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc27Q3V036 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc27Q3V036 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc27Q3V036 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Ccdc27Q3V036 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.02■□□□□ 0.8
Ccdc27Q3V036 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc27Q3V036 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc27Q3V036 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc27Q3V036 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc27Q3V036 Gm44291-201ENSMUST00000203102 2865 ntBASIC20.02■□□□□ 0.8
Ccdc27Q3V036 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc27Q3V036 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc27Q3V036 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc27Q3V036 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc27Q3V036 App-207ENSMUST00000227737 2827 ntBASIC20.02■□□□□ 0.79
Ccdc27Q3V036 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc27Q3V036 Gm32996-201ENSMUST00000199828 1447 ntBASIC20.02■□□□□ 0.79
Ccdc27Q3V036 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Ccdc27Q3V036 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc27Q3V036 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Ccdc27Q3V036 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC20.01■□□□□ 0.79
Ccdc27Q3V036 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC20.01■□□□□ 0.79
Ccdc27Q3V036 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc27Q3V036 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc27Q3V036 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc27Q3V036 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc27Q3V036 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Ccdc27Q3V036 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc27Q3V036 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc27Q3V036 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.01■□□□□ 0.79
Ccdc27Q3V036 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc27Q3V036 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Ccdc27Q3V036 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc27Q3V036 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc27Q3V036 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc27Q3V036 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc27Q3V036 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms