Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43aQ3TL54 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43aQ3TL54 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43aQ3TL54 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim43aQ3TL54 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43aQ3TL54 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.69■□□□□ 0.26
Trim43aQ3TL54 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Gm26039-201ENSMUST00000158152 144 ntBASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Gm6659-201ENSMUST00000174752 547 ntBASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Gm18032-201ENSMUST00000222541 538 ntBASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43aQ3TL54 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trim43aQ3TL54 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim43aQ3TL54 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Gm18101-201ENSMUST00000215769 548 ntBASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Sybu-209ENSMUST00000228639 4113 ntBASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.67■□□□□ 0.26
Trim43aQ3TL54 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43aQ3TL54 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43aQ3TL54 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43aQ3TL54 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43aQ3TL54 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.66■□□□□ 0.26
Trim43aQ3TL54 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43aQ3TL54 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Trim43aQ3TL54 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43aQ3TL54 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43aQ3TL54 Mir1668-201ENSMUST00000184114 107 ntBASIC16.66■□□□□ 0.26
Trim43aQ3TL54 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43aQ3TL54 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43aQ3TL54 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim43aQ3TL54 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms