Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm14723-201ENSMUST00000118686 215 ntBASIC13.99□□□□□ -0.17
Chd8Q09XV5 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.99□□□□□ -0.17
Chd8Q09XV5 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd8Q09XV5 BC021767-201ENSMUST00000126387 1716 ntBASIC13.99□□□□□ -0.17
Chd8Q09XV5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chd8Q09XV5 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Chd8Q09XV5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chd8Q09XV5 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Gm9182-201ENSMUST00000217829 639 ntBASIC13.98□□□□□ -0.17
Chd8Q09XV5 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.98□□□□□ -0.17
Chd8Q09XV5 Dupd1-202ENSMUST00000224735 548 ntBASIC13.98□□□□□ -0.17
Chd8Q09XV5 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chd8Q09XV5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd8Q09XV5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd8Q09XV5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chd8Q09XV5 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Chd8Q09XV5 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Chd8Q09XV5 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chd8Q09XV5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd8Q09XV5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Chd8Q09XV5 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Chd8Q09XV5 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Chd8Q09XV5 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.97□□□□□ -0.17
Chd8Q09XV5 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd8Q09XV5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chd8Q09XV5 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.97□□□□□ -0.17
Chd8Q09XV5 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.97□□□□□ -0.17
Chd8Q09XV5 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Chd8Q09XV5 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chd8Q09XV5 Mir6392-201ENSMUST00000184924 108 ntBASIC13.97□□□□□ -0.17
Chd8Q09XV5 Gm29199-201ENSMUST00000187766 775 ntBASIC13.97□□□□□ -0.17
Chd8Q09XV5 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.97□□□□□ -0.17
Chd8Q09XV5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd8Q09XV5 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd8Q09XV5 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chd8Q09XV5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd8Q09XV5 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chd8Q09XV5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd8Q09XV5 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd8Q09XV5 Gm12390-201ENSMUST00000117897 397 ntBASIC13.96□□□□□ -0.17
Chd8Q09XV5 Gm27341-201ENSMUST00000183570 106 ntBASIC13.96□□□□□ -0.17
Chd8Q09XV5 Gm27501-201ENSMUST00000183599 107 ntBASIC13.96□□□□□ -0.17
Chd8Q09XV5 Gm44608-201ENSMUST00000206827 855 ntBASIC13.96□□□□□ -0.17
Chd8Q09XV5 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.96□□□□□ -0.17
Chd8Q09XV5 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd8Q09XV5 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd8Q09XV5 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.96□□□□□ -0.17
Chd8Q09XV5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chd8Q09XV5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd8Q09XV5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd8Q09XV5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd8Q09XV5 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
Chd8Q09XV5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd8Q09XV5 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd8Q09XV5 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chd8Q09XV5 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.96□□□□□ -0.17
Chd8Q09XV5 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms