Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Gm44719-201ENSMUST00000206404 149 ntBASIC11.47□□□□□ -0.57
Hspg2Q05793 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.47□□□□□ -0.57
Hspg2Q05793 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.47□□□□□ -0.57
Hspg2Q05793 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Hspg2Q05793 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Hspg2Q05793 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Hspg2Q05793 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hspg2Q05793 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hspg2Q05793 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.46□□□□□ -0.57
Hspg2Q05793 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Hspg2Q05793 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hspg2Q05793 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.46□□□□□ -0.57
Hspg2Q05793 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Hspg2Q05793 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.46□□□□□ -0.57
Hspg2Q05793 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.46□□□□□ -0.57
Hspg2Q05793 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hspg2Q05793 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Hspg2Q05793 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.46□□□□□ -0.57
Hspg2Q05793 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Hspg2Q05793 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hspg2Q05793 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hspg2Q05793 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.46□□□□□ -0.57
Hspg2Q05793 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hspg2Q05793 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hspg2Q05793 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Hspg2Q05793 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.46□□□□□ -0.57
Hspg2Q05793 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Hspg2Q05793 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hspg2Q05793 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hspg2Q05793 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Hspg2Q05793 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hspg2Q05793 Gm9385-201ENSMUST00000117563 472 ntBASIC11.46□□□□□ -0.58
Hspg2Q05793 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.46□□□□□ -0.58
Hspg2Q05793 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.46□□□□□ -0.58
Hspg2Q05793 Mir7684-201ENSMUST00000183858 60 ntBASIC11.46□□□□□ -0.58
Hspg2Q05793 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.46□□□□□ -0.58
Hspg2Q05793 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hspg2Q05793 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Hspg2Q05793 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.45□□□□□ -0.58
Hspg2Q05793 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hspg2Q05793 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC11.45□□□□□ -0.58
Hspg2Q05793 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Hspg2Q05793 Gm2810-201ENSMUST00000118681 990 ntBASIC11.45□□□□□ -0.58
Hspg2Q05793 Gm15693-201ENSMUST00000120470 637 ntBASIC11.45□□□□□ -0.58
Hspg2Q05793 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Hspg2Q05793 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.45□□□□□ -0.58
Hspg2Q05793 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.45□□□□□ -0.58
Hspg2Q05793 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.45□□□□□ -0.58
Hspg2Q05793 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.45□□□□□ -0.58
Hspg2Q05793 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Hspg2Q05793 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC11.45□□□□□ -0.58
Hspg2Q05793 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.45□□□□□ -0.58
Hspg2Q05793 Gm44832-201ENSMUST00000208849 2303 ntBASIC11.45□□□□□ -0.58
Hspg2Q05793 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Hspg2Q05793 Gm13015-201ENSMUST00000118674 204 ntBASIC11.45□□□□□ -0.58
Hspg2Q05793 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.45□□□□□ -0.58
Hspg2Q05793 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.45□□□□□ -0.58
Hspg2Q05793 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.45□□□□□ -0.58
Hspg2Q05793 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.45□□□□□ -0.58
Hspg2Q05793 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Hspg2Q05793 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Hspg2Q05793 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hspg2Q05793 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hspg2Q05793 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms