Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thumpd3P97770 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thumpd3P97770 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.03■□□□□ 0.16
Thumpd3P97770 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thumpd3P97770 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thumpd3P97770 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thumpd3P97770 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.03■□□□□ 0.16
Thumpd3P97770 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thumpd3P97770 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.03■□□□□ 0.16
Thumpd3P97770 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thumpd3P97770 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thumpd3P97770 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Thumpd3P97770 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Thumpd3P97770 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thumpd3P97770 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thumpd3P97770 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thumpd3P97770 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Thumpd3P97770 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thumpd3P97770 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thumpd3P97770 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Thumpd3P97770 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thumpd3P97770 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Thumpd3P97770 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thumpd3P97770 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thumpd3P97770 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Thumpd3P97770 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Thumpd3P97770 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Thumpd3P97770 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Thumpd3P97770 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Thumpd3P97770 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.02■□□□□ 0.16
Thumpd3P97770 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Thumpd3P97770 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.02■□□□□ 0.16
Thumpd3P97770 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Thumpd3P97770 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Thumpd3P97770 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Thumpd3P97770 Gm17807-201ENSMUST00000186869 298 ntBASIC16.02■□□□□ 0.16
Thumpd3P97770 Gm37722-201ENSMUST00000193757 208 ntBASIC16.02■□□□□ 0.16
Thumpd3P97770 Gm18421-201ENSMUST00000204122 625 ntBASIC16.02■□□□□ 0.16
Thumpd3P97770 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Thumpd3P97770 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Thumpd3P97770 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Thumpd3P97770 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Thumpd3P97770 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Thumpd3P97770 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Thumpd3P97770 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.02■□□□□ 0.15
Thumpd3P97770 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Thumpd3P97770 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Thumpd3P97770 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Thumpd3P97770 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Thumpd3P97770 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Thumpd3P97770 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Thumpd3P97770 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.02■□□□□ 0.15
Thumpd3P97770 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Thumpd3P97770 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Thumpd3P97770 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Thumpd3P97770 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Thumpd3P97770 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Thumpd3P97770 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
Thumpd3P97770 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Thumpd3P97770 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Thumpd3P97770 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.01■□□□□ 0.15
Thumpd3P97770 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Thumpd3P97770 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Thumpd3P97770 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Thumpd3P97770 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.01■□□□□ 0.15
Thumpd3P97770 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.01■□□□□ 0.15
Thumpd3P97770 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Thumpd3P97770 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Thumpd3P97770 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.01■□□□□ 0.15
Thumpd3P97770 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Thumpd3P97770 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.01■□□□□ 0.15
Thumpd3P97770 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Thumpd3P97770 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.01■□□□□ 0.15
Thumpd3P97770 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Thumpd3P97770 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Thumpd3P97770 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Thumpd3P97770 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16■□□□□ 0.15
Thumpd3P97770 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Mir770-201ENSMUST00000103252 94 ntBASIC16■□□□□ 0.15
Thumpd3P97770 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16■□□□□ 0.15
Thumpd3P97770 Gm36967-201ENSMUST00000193814 266 ntBASIC16■□□□□ 0.15
Thumpd3P97770 AC122351.1-201ENSMUST00000220467 126 ntBASIC16■□□□□ 0.15
Thumpd3P97770 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16■□□□□ 0.15
Thumpd3P97770 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Thumpd3P97770 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms