Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Npas1P97459 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Npas1P97459 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.21□□□□□ -0.29
Npas1P97459 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Gm15378-201ENSMUST00000121894 207 ntBASIC13.21□□□□□ -0.29
Npas1P97459 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.21□□□□□ -0.29
Npas1P97459 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.21□□□□□ -0.29
Npas1P97459 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.21□□□□□ -0.29
Npas1P97459 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Npas1P97459 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Npas1P97459 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Npas1P97459 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Npas1P97459 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Npas1P97459 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Npas1P97459 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Npas1P97459 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Npas1P97459 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Npas1P97459 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Npas1P97459 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npas1P97459 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.2□□□□□ -0.3
Npas1P97459 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npas1P97459 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npas1P97459 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npas1P97459 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.2□□□□□ -0.3
Npas1P97459 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npas1P97459 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.2□□□□□ -0.3
Npas1P97459 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npas1P97459 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npas1P97459 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Npas1P97459 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npas1P97459 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Npas1P97459 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npas1P97459 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npas1P97459 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Npas1P97459 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Npas1P97459 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Npas1P97459 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.2□□□□□ -0.3
Npas1P97459 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Npas1P97459 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Npas1P97459 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Npas1P97459 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npas1P97459 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Npas1P97459 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Npas1P97459 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Npas1P97459 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Npas1P97459 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Npas1P97459 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.19□□□□□ -0.3
Npas1P97459 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Npas1P97459 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Npas1P97459 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Npas1P97459 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Npas1P97459 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Npas1P97459 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Npas1P97459 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.19□□□□□ -0.3
Npas1P97459 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Npas1P97459 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Npas1P97459 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Npas1P97459 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Npas1P97459 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Npas1P97459 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Npas1P97459 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Npas1P97459 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Npas1P97459 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.19□□□□□ -0.3
Npas1P97459 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.19□□□□□ -0.3
Npas1P97459 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Npas1P97459 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.19□□□□□ -0.3
Npas1P97459 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.19□□□□□ -0.3
Npas1P97459 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Npas1P97459 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Npas1P97459 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms