Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.08■□□□□ 0.33
Trim43cP86449 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim43cP86449 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trim43cP86449 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim43cP86449 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.08■□□□□ 0.32
Trim43cP86449 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43cP86449 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.08■□□□□ 0.32
Trim43cP86449 Gm27459-201ENSMUST00000184860 107 ntBASIC17.08■□□□□ 0.32
Trim43cP86449 Gm17971-201ENSMUST00000190239 806 ntBASIC17.08■□□□□ 0.32
Trim43cP86449 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.08■□□□□ 0.32
Trim43cP86449 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.08■□□□□ 0.32
Trim43cP86449 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43cP86449 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43cP86449 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43cP86449 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43cP86449 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43cP86449 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43cP86449 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43cP86449 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43cP86449 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43cP86449 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43cP86449 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43cP86449 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim43cP86449 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43cP86449 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Trim43cP86449 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43cP86449 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43cP86449 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.07■□□□□ 0.32
Trim43cP86449 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43cP86449 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43cP86449 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43cP86449 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.07■□□□□ 0.32
Trim43cP86449 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43cP86449 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43cP86449 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.07■□□□□ 0.32
Trim43cP86449 Gm11780-201ENSMUST00000136880 516 ntBASIC17.07■□□□□ 0.32
Trim43cP86449 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.07■□□□□ 0.32
Trim43cP86449 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim43cP86449 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.07■□□□□ 0.32
Trim43cP86449 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim43cP86449 Gm8655-201ENSMUST00000221159 852 ntBASIC17.07■□□□□ 0.32
Trim43cP86449 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43cP86449 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43cP86449 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trim43cP86449 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43cP86449 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43cP86449 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43cP86449 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim43cP86449 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim43cP86449 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Trim43cP86449 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.06■□□□□ 0.32
Trim43cP86449 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Trim43cP86449 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trim43cP86449 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim43cP86449 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Trim43cP86449 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim43cP86449 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Trim43cP86449 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim43cP86449 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43cP86449 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43cP86449 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43cP86449 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trim43cP86449 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43cP86449 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43cP86449 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trim43cP86449 Gm8097-201ENSMUST00000117903 829 ntBASIC17.05■□□□□ 0.32
Trim43cP86449 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43cP86449 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43cP86449 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim43cP86449 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.05■□□□□ 0.32
Trim43cP86449 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43cP86449 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43cP86449 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Trim43cP86449 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43cP86449 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43cP86449 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.05■□□□□ 0.32
Trim43cP86449 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43cP86449 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43cP86449 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43cP86449 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim43cP86449 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms