Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.99□□□□□ -0.17
SgcbP82349 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
SgcbP82349 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.99□□□□□ -0.17
SgcbP82349 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
SgcbP82349 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.99□□□□□ -0.17
SgcbP82349 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SgcbP82349 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.98□□□□□ -0.17
SgcbP82349 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.98□□□□□ -0.17
SgcbP82349 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
SgcbP82349 Gm4535-201ENSMUST00000182274 558 ntBASIC13.98□□□□□ -0.17
SgcbP82349 Gm6296-201ENSMUST00000222599 943 ntBASIC13.98□□□□□ -0.17
SgcbP82349 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Gm10355-201ENSMUST00000097146 517 ntBASIC13.98□□□□□ -0.17
SgcbP82349 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.98□□□□□ -0.17
SgcbP82349 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.98□□□□□ -0.17
SgcbP82349 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SgcbP82349 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SgcbP82349 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SgcbP82349 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SgcbP82349 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.97□□□□□ -0.17
SgcbP82349 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SgcbP82349 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SgcbP82349 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SgcbP82349 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.97□□□□□ -0.17
SgcbP82349 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.97□□□□□ -0.17
SgcbP82349 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SgcbP82349 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SgcbP82349 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SgcbP82349 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.97□□□□□ -0.17
SgcbP82349 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SgcbP82349 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.97□□□□□ -0.17
SgcbP82349 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SgcbP82349 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SgcbP82349 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SgcbP82349 Gm18622-201ENSMUST00000219361 595 ntBASIC13.97□□□□□ -0.17
SgcbP82349 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SgcbP82349 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.97□□□□□ -0.17
SgcbP82349 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SgcbP82349 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SgcbP82349 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SgcbP82349 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SgcbP82349 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SgcbP82349 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SgcbP82349 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SgcbP82349 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SgcbP82349 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SgcbP82349 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SgcbP82349 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SgcbP82349 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
SgcbP82349 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SgcbP82349 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SgcbP82349 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SgcbP82349 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.96□□□□□ -0.17
SgcbP82349 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SgcbP82349 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
SgcbP82349 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SgcbP82349 Gm44357-201ENSMUST00000195897 142 ntBASIC13.96□□□□□ -0.17
SgcbP82349 Gm19658-201ENSMUST00000196231 138 ntBASIC13.96□□□□□ -0.17
SgcbP82349 Gm44367-201ENSMUST00000196836 138 ntBASIC13.96□□□□□ -0.17
SgcbP82349 Gm44350-201ENSMUST00000197197 138 ntBASIC13.96□□□□□ -0.17
SgcbP82349 Gm44390-201ENSMUST00000197533 144 ntBASIC13.96□□□□□ -0.17
SgcbP82349 Gm44313-201ENSMUST00000198018 138 ntBASIC13.96□□□□□ -0.17
SgcbP82349 Gm44486-201ENSMUST00000198508 138 ntBASIC13.96□□□□□ -0.17
SgcbP82349 Gm44314-201ENSMUST00000199263 138 ntBASIC13.96□□□□□ -0.17
SgcbP82349 Gm44394-201ENSMUST00000199558 138 ntBASIC13.96□□□□□ -0.17
SgcbP82349 Gm44484-201ENSMUST00000199873 138 ntBASIC13.96□□□□□ -0.17
SgcbP82349 Gm44466-201ENSMUST00000200264 138 ntBASIC13.96□□□□□ -0.17
SgcbP82349 Gm44359-201ENSMUST00000200671 138 ntBASIC13.96□□□□□ -0.17
SgcbP82349 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SgcbP82349 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.96□□□□□ -0.17
SgcbP82349 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SgcbP82349 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.96□□□□□ -0.17
SgcbP82349 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SgcbP82349 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms