Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CiitaP79621 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CiitaP79621 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CiitaP79621 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CiitaP79621 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CiitaP79621 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
CiitaP79621 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CiitaP79621 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CiitaP79621 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CiitaP79621 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CiitaP79621 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CiitaP79621 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CiitaP79621 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CiitaP79621 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
CiitaP79621 Gm18489-201ENSMUST00000172565 551 ntBASIC16.99■□□□□ 0.31
CiitaP79621 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.99■□□□□ 0.31
CiitaP79621 Gm4899-201ENSMUST00000178708 719 ntBASIC16.99■□□□□ 0.31
CiitaP79621 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CiitaP79621 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.99■□□□□ 0.31
CiitaP79621 Gm45167-201ENSMUST00000208007 322 ntBASIC16.99■□□□□ 0.31
CiitaP79621 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.99■□□□□ 0.31
CiitaP79621 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CiitaP79621 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CiitaP79621 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CiitaP79621 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.99■□□□□ 0.31
CiitaP79621 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CiitaP79621 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CiitaP79621 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CiitaP79621 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CiitaP79621 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CiitaP79621 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CiitaP79621 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CiitaP79621 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CiitaP79621 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CiitaP79621 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CiitaP79621 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CiitaP79621 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CiitaP79621 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CiitaP79621 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CiitaP79621 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CiitaP79621 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.98■□□□□ 0.31
CiitaP79621 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CiitaP79621 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.98■□□□□ 0.31
CiitaP79621 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.98■□□□□ 0.31
CiitaP79621 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.98■□□□□ 0.31
CiitaP79621 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.98■□□□□ 0.31
CiitaP79621 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CiitaP79621 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CiitaP79621 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CiitaP79621 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.98■□□□□ 0.31
CiitaP79621 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.98■□□□□ 0.31
CiitaP79621 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.98■□□□□ 0.31
CiitaP79621 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CiitaP79621 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CiitaP79621 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CiitaP79621 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CiitaP79621 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CiitaP79621 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.98■□□□□ 0.31
CiitaP79621 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CiitaP79621 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CiitaP79621 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CiitaP79621 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CiitaP79621 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.97■□□□□ 0.31
CiitaP79621 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.97■□□□□ 0.31
CiitaP79621 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CiitaP79621 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CiitaP79621 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CiitaP79621 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CiitaP79621 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CiitaP79621 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CiitaP79621 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CiitaP79621 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CiitaP79621 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CiitaP79621 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.97■□□□□ 0.31
CiitaP79621 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CiitaP79621 Gm9727-201ENSMUST00000161387 555 ntBASIC16.97■□□□□ 0.31
CiitaP79621 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.97■□□□□ 0.31
CiitaP79621 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.97■□□□□ 0.31
CiitaP79621 Gm9682-201ENSMUST00000197505 556 ntBASIC16.97■□□□□ 0.31
CiitaP79621 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.97■□□□□ 0.31
CiitaP79621 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.97■□□□□ 0.31
CiitaP79621 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.97■□□□□ 0.31
CiitaP79621 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CiitaP79621 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.97■□□□□ 0.31
CiitaP79621 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CiitaP79621 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CiitaP79621 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CiitaP79621 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CiitaP79621 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CiitaP79621 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CiitaP79621 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.96■□□□□ 0.31
CiitaP79621 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CiitaP79621 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CiitaP79621 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CiitaP79621 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CiitaP79621 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CiitaP79621 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CiitaP79621 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CiitaP79621 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CiitaP79621 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms