Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.33□□□□□ -0.44
Ctdsp1P58466 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Cdc34b-202ENSMUST00000188741 1252 ntBASIC12.33□□□□□ -0.44
Ctdsp1P58466 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdsp1P58466 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.33□□□□□ -0.44
Ctdsp1P58466 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Ctdsp1P58466 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ctdsp1P58466 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ctdsp1P58466 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctdsp1P58466 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ctdsp1P58466 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ctdsp1P58466 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctdsp1P58466 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctdsp1P58466 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctdsp1P58466 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ctdsp1P58466 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.31□□□□□ -0.44
Ctdsp1P58466 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctdsp1P58466 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctdsp1P58466 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ctdsp1P58466 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ctdsp1P58466 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ctdsp1P58466 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctdsp1P58466 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctdsp1P58466 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctdsp1P58466 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctdsp1P58466 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctdsp1P58466 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctdsp1P58466 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctdsp1P58466 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ctdsp1P58466 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctdsp1P58466 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ctdsp1P58466 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ctdsp1P58466 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ctdsp1P58466 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.3□□□□□ -0.44
Ctdsp1P58466 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.3□□□□□ -0.44
Ctdsp1P58466 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.3□□□□□ -0.44
Ctdsp1P58466 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ctdsp1P58466 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms