Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lim2P56563 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lim2P56563 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.7■□□□□ 0.1
Lim2P56563 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lim2P56563 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Lim2P56563 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lim2P56563 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lim2P56563 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Lim2P56563 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Lim2P56563 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lim2P56563 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lim2P56563 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.69■□□□□ 0.1
Lim2P56563 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Lim2P56563 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lim2P56563 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lim2P56563 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Lim2P56563 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lim2P56563 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lim2P56563 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lim2P56563 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lim2P56563 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lim2P56563 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lim2P56563 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.69■□□□□ 0.1
Lim2P56563 Gm13884-201ENSMUST00000118103 829 ntBASIC15.69■□□□□ 0.1
Lim2P56563 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.69■□□□□ 0.1
Lim2P56563 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.69■□□□□ 0.1
Lim2P56563 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.69■□□□□ 0.1
Lim2P56563 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.69■□□□□ 0.1
Lim2P56563 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.69■□□□□ 0.1
Lim2P56563 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lim2P56563 Rps4l-201ENSMUST00000071745 943 ntBASIC15.69■□□□□ 0.1
Lim2P56563 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lim2P56563 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Lim2P56563 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Lim2P56563 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lim2P56563 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lim2P56563 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lim2P56563 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Lim2P56563 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Lim2P56563 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lim2P56563 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Lim2P56563 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lim2P56563 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lim2P56563 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lim2P56563 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lim2P56563 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lim2P56563 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Lim2P56563 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lim2P56563 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lim2P56563 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lim2P56563 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.68■□□□□ 0.1
Lim2P56563 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.68■□□□□ 0.1
Lim2P56563 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.68■□□□□ 0.1
Lim2P56563 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.68■□□□□ 0.1
Lim2P56563 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.68■□□□□ 0.1
Lim2P56563 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lim2P56563 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.68■□□□□ 0.1
Lim2P56563 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.68■□□□□ 0.1
Lim2P56563 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.68■□□□□ 0.1
Lim2P56563 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.68■□□□□ 0.1
Lim2P56563 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.68■□□□□ 0.1
Lim2P56563 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.68■□□□□ 0.1
Lim2P56563 Gm8825-201ENSMUST00000182565 998 ntBASIC15.68■□□□□ 0.1
Lim2P56563 Gm4518-201ENSMUST00000182638 718 ntBASIC15.68■□□□□ 0.1
Lim2P56563 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.68■□□□□ 0.1
Lim2P56563 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.68■□□□□ 0.1
Lim2P56563 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.68■□□□□ 0.1
Lim2P56563 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.68■□□□□ 0.1
Lim2P56563 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lim2P56563 Gm6296-201ENSMUST00000222599 943 ntBASIC15.68■□□□□ 0.1
Lim2P56563 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.68■□□□□ 0.1
Lim2P56563 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.68■□□□□ 0.1
Lim2P56563 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lim2P56563 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lim2P56563 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lim2P56563 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.68■□□□□ 0.1
Lim2P56563 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lim2P56563 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lim2P56563 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.68■□□□□ 0.1
Lim2P56563 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lim2P56563 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lim2P56563 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Lim2P56563 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Lim2P56563 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lim2P56563 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lim2P56563 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Lim2P56563 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lim2P56563 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lim2P56563 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Lim2P56563 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lim2P56563 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Lim2P56563 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lim2P56563 Gm8097-201ENSMUST00000117903 829 ntBASIC15.67■□□□□ 0.1
Lim2P56563 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Lim2P56563 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.67■□□□□ 0.1
Lim2P56563 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lim2P56563 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Lim2P56563 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lim2P56563 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.67■□□□□ 0.1
Lim2P56563 Gm6376-201ENSMUST00000209407 580 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms