Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks2P56390 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks2P56390 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.14□□□□□ -0.31
Cks2P56390 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks2P56390 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks2P56390 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks2P56390 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks2P56390 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks2P56390 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks2P56390 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.14□□□□□ -0.31
Cks2P56390 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.14□□□□□ -0.31
Cks2P56390 Gm13436-201ENSMUST00000120418 567 ntBASIC13.14□□□□□ -0.31
Cks2P56390 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.14□□□□□ -0.31
Cks2P56390 Gm10052-201ENSMUST00000168019 960 ntBASIC13.14□□□□□ -0.31
Cks2P56390 Mir5130-201ENSMUST00000175160 84 ntBASIC13.14□□□□□ -0.31
Cks2P56390 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.14□□□□□ -0.31
Cks2P56390 Gm7729-201ENSMUST00000050143 801 ntBASIC13.14□□□□□ -0.31
Cks2P56390 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.14□□□□□ -0.31
Cks2P56390 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cks2P56390 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks2P56390 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks2P56390 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks2P56390 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks2P56390 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.14□□□□□ -0.31
Cks2P56390 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cks2P56390 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks2P56390 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cks2P56390 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cks2P56390 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Cks2P56390 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.13□□□□□ -0.31
Cks2P56390 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cks2P56390 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.13□□□□□ -0.31
Cks2P56390 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Cks2P56390 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Cks2P56390 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.13□□□□□ -0.31
Cks2P56390 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.13□□□□□ -0.31
Cks2P56390 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cks2P56390 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.13□□□□□ -0.31
Cks2P56390 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cks2P56390 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.13□□□□□ -0.31
Cks2P56390 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cks2P56390 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Cks2P56390 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Cks2P56390 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cks2P56390 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cks2P56390 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Cks2P56390 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.12□□□□□ -0.31
Cks2P56390 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Cks2P56390 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.12□□□□□ -0.31
Cks2P56390 Gm44430-201ENSMUST00000203376 995 ntBASIC13.12□□□□□ -0.31
Cks2P56390 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cks2P56390 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cks2P56390 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cks2P56390 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms