Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh11P55288 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh11P55288 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh11P55288 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cdh11P55288 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cdh11P55288 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.35□□□□□ -0.11
Cdh11P55288 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cdh11P55288 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.35□□□□□ -0.11
Cdh11P55288 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.35□□□□□ -0.11
Cdh11P55288 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh11P55288 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Cdh11P55288 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh11P55288 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.35□□□□□ -0.11
Cdh11P55288 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh11P55288 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh11P55288 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh11P55288 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.35□□□□□ -0.11
Cdh11P55288 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh11P55288 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.35□□□□□ -0.11
Cdh11P55288 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cdh11P55288 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cdh11P55288 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh11P55288 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh11P55288 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh11P55288 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh11P55288 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh11P55288 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh11P55288 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh11P55288 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh11P55288 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.34□□□□□ -0.11
Cdh11P55288 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.34□□□□□ -0.11
Cdh11P55288 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh11P55288 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh11P55288 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh11P55288 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh11P55288 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh11P55288 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.34□□□□□ -0.11
Cdh11P55288 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cdh11P55288 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh11P55288 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh11P55288 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh11P55288 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh11P55288 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh11P55288 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.33□□□□□ -0.11
Cdh11P55288 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh11P55288 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cdh11P55288 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh11P55288 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cdh11P55288 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh11P55288 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh11P55288 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh11P55288 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh11P55288 Gm45328-201ENSMUST00000210942 917 ntBASIC14.33□□□□□ -0.12
Cdh11P55288 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh11P55288 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh11P55288 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh11P55288 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh11P55288 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh11P55288 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh11P55288 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh11P55288 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Cdh11P55288 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.33□□□□□ -0.12
Cdh11P55288 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh11P55288 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh11P55288 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Cdh11P55288 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cdh11P55288 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cdh11P55288 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cdh11P55288 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh11P55288 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh11P55288 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh11P55288 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh11P55288 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh11P55288 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh11P55288 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh11P55288 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.32□□□□□ -0.12
Cdh11P55288 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh11P55288 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh11P55288 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh11P55288 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Cdh11P55288 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
Cdh11P55288 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.32□□□□□ -0.12
Cdh11P55288 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.32□□□□□ -0.12
Cdh11P55288 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh11P55288 Gm11336-201ENSMUST00000118168 334 ntBASIC14.32□□□□□ -0.12
Cdh11P55288 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.32□□□□□ -0.12
Cdh11P55288 Mir3081-201ENSMUST00000175305 84 ntBASIC14.32□□□□□ -0.12
Cdh11P55288 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh11P55288 Gm18669-201ENSMUST00000216049 778 ntBASIC14.32□□□□□ -0.12
Cdh11P55288 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh11P55288 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh11P55288 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh11P55288 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh11P55288 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.32□□□□□ -0.12
Cdh11P55288 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cdh11P55288 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cdh11P55288 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh11P55288 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh11P55288 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdh11P55288 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms