Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nedd4P46935 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nedd4P46935 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nedd4P46935 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nedd4P46935 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nedd4P46935 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC18.83■□□□□ 0.6
Nedd4P46935 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nedd4P46935 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC18.83■□□□□ 0.6
Nedd4P46935 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Nedd4P46935 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nedd4P46935 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nedd4P46935 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nedd4P46935 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.83■□□□□ 0.6
Nedd4P46935 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nedd4P46935 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nedd4P46935 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nedd4P46935 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Nedd4P46935 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nedd4P46935 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nedd4P46935 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nedd4P46935 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nedd4P46935 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nedd4P46935 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nedd4P46935 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd4P46935 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.82■□□□□ 0.6
Nedd4P46935 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd4P46935 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd4P46935 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd4P46935 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd4P46935 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.82■□□□□ 0.6
Nedd4P46935 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd4P46935 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd4P46935 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd4P46935 Gm6415-201ENSMUST00000118488 348 ntBASIC18.82■□□□□ 0.6
Nedd4P46935 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.82■□□□□ 0.6
Nedd4P46935 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd4P46935 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd4P46935 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd4P46935 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.82■□□□□ 0.6
Nedd4P46935 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd4P46935 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd4P46935 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd4P46935 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.82■□□□□ 0.6
Nedd4P46935 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd4P46935 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd4P46935 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nedd4P46935 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nedd4P46935 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nedd4P46935 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nedd4P46935 Gm7488-201ENSMUST00000117148 684 ntBASIC18.81■□□□□ 0.6
Nedd4P46935 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nedd4P46935 Gm18187-201ENSMUST00000196476 984 ntBASIC18.81■□□□□ 0.6
Nedd4P46935 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC18.81■□□□□ 0.6
Nedd4P46935 Gm7730-201ENSMUST00000212486 454 ntBASIC18.81■□□□□ 0.6
Nedd4P46935 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.81■□□□□ 0.6
Nedd4P46935 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nedd4P46935 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nedd4P46935 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nedd4P46935 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nedd4P46935 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nedd4P46935 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nedd4P46935 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nedd4P46935 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nedd4P46935 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nedd4P46935 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nedd4P46935 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nedd4P46935 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd4P46935 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Nedd4P46935 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd4P46935 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.8■□□□□ 0.6
Nedd4P46935 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd4P46935 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.8■□□□□ 0.6
Nedd4P46935 Gm13453-201ENSMUST00000118708 357 ntBASIC18.8■□□□□ 0.6
Nedd4P46935 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC18.8■□□□□ 0.6
Nedd4P46935 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.8■□□□□ 0.6
Nedd4P46935 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd4P46935 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd4P46935 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd4P46935 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd4P46935 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd4P46935 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd4P46935 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.8■□□□□ 0.6
Nedd4P46935 Gm15222-202ENSMUST00000228667 1726 ntBASIC18.8■□□□□ 0.6
Nedd4P46935 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd4P46935 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nedd4P46935 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nedd4P46935 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd4P46935 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nedd4P46935 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nedd4P46935 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nedd4P46935 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nedd4P46935 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nedd4P46935 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nedd4P46935 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nedd4P46935 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Nedd4P46935 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC18.79■□□□□ 0.6
Nedd4P46935 AC135669.1-201ENSMUST00000213585 412 ntBASIC18.79■□□□□ 0.6
Nedd4P46935 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.79■□□□□ 0.6
Nedd4P46935 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Nedd4P46935 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms