Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm27702-201ENSMUST00000184512 56 ntBASIC14.84□□□□□ -0.03
Nkx2-6P43688 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nkx2-6P43688 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nkx2-6P43688 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Nkx2-6P43688 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nkx2-6P43688 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.83□□□□□ -0.03
Nkx2-6P43688 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.83□□□□□ -0.04
Nkx2-6P43688 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.83□□□□□ -0.04
Nkx2-6P43688 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.83□□□□□ -0.04
Nkx2-6P43688 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-6P43688 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nkx2-6P43688 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-6P43688 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-6P43688 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-6P43688 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-6P43688 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-6P43688 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-6P43688 Gm15358-201ENSMUST00000119249 520 ntBASIC14.82□□□□□ -0.04
Nkx2-6P43688 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-6P43688 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-6P43688 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nkx2-6P43688 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-6P43688 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-6P43688 Gm10175-201ENSMUST00000086013 645 ntBASIC14.82□□□□□ -0.04
Nkx2-6P43688 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nkx2-6P43688 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-6P43688 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-6P43688 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-6P43688 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-6P43688 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.82□□□□□ -0.04
Nkx2-6P43688 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nkx2-6P43688 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Gm37153-201ENSMUST00000193637 231 ntBASIC14.81□□□□□ -0.04
Nkx2-6P43688 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.81□□□□□ -0.04
Nkx2-6P43688 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.81□□□□□ -0.04
Nkx2-6P43688 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.81□□□□□ -0.04
Nkx2-6P43688 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nkx2-6P43688 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms