Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HttP42859 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HttP42859 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HttP42859 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HttP42859 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HttP42859 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HttP42859 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC16.61■□□□□ 0.25
HttP42859 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HttP42859 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HttP42859 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HttP42859 Gm15824-201ENSMUST00000119516 955 ntBASIC16.61■□□□□ 0.25
HttP42859 Mir3102-201ENSMUST00000175555 104 ntBASIC16.61■□□□□ 0.25
HttP42859 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HttP42859 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HttP42859 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HttP42859 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HttP42859 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HttP42859 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HttP42859 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HttP42859 Shd-206ENSMUST00000225145 998 ntBASIC16.61■□□□□ 0.25
HttP42859 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HttP42859 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HttP42859 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.6■□□□□ 0.25
HttP42859 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HttP42859 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.6■□□□□ 0.25
HttP42859 Gm16026-204ENSMUST00000162652 683 ntBASIC16.6■□□□□ 0.25
HttP42859 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HttP42859 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.6■□□□□ 0.25
HttP42859 Gm18018-201ENSMUST00000198273 408 ntBASIC16.6■□□□□ 0.25
HttP42859 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HttP42859 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HttP42859 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HttP42859 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HttP42859 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HttP42859 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HttP42859 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HttP42859 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HttP42859 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HttP42859 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HttP42859 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HttP42859 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.6■□□□□ 0.25
HttP42859 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HttP42859 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC16.6■□□□□ 0.25
HttP42859 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HttP42859 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HttP42859 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.6■□□□□ 0.25
HttP42859 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HttP42859 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HttP42859 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HttP42859 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HttP42859 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HttP42859 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HttP42859 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HttP42859 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.59■□□□□ 0.25
HttP42859 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.59■□□□□ 0.25
HttP42859 Gm15483-201ENSMUST00000120338 456 ntBASIC16.59■□□□□ 0.25
HttP42859 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HttP42859 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
HttP42859 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HttP42859 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HttP42859 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HttP42859 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HttP42859 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.59■□□□□ 0.25
HttP42859 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HttP42859 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HttP42859 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HttP42859 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HttP42859 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HttP42859 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HttP42859 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HttP42859 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HttP42859 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.59■□□□□ 0.25
HttP42859 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HttP42859 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HttP42859 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HttP42859 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HttP42859 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
HttP42859 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.58■□□□□ 0.24
HttP42859 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HttP42859 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HttP42859 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.58■□□□□ 0.24
HttP42859 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HttP42859 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.58■□□□□ 0.24
HttP42859 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HttP42859 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HttP42859 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HttP42859 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HttP42859 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HttP42859 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HttP42859 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HttP42859 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HttP42859 AC238811.1-201ENSMUST00000225302 441 ntBASIC16.57■□□□□ 0.24
HttP42859 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HttP42859 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HttP42859 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HttP42859 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HttP42859 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.57■□□□□ 0.24
HttP42859 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.57■□□□□ 0.24
HttP42859 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HttP42859 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms