Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LdlrP35951 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Gm26039-201ENSMUST00000158152 144 ntBASIC15.65■□□□□ 0.1
LdlrP35951 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Gm27742-201ENSMUST00000184667 60 ntBASIC15.65■□□□□ 0.1
LdlrP35951 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
LdlrP35951 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
LdlrP35951 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.65■□□□□ 0.1
LdlrP35951 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LdlrP35951 BC037039-201ENSMUST00000192003 2205 ntBASIC15.64■□□□□ 0.09
LdlrP35951 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.64■□□□□ 0.09
LdlrP35951 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.64■□□□□ 0.09
LdlrP35951 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LdlrP35951 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LdlrP35951 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.64■□□□□ 0.09
LdlrP35951 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LdlrP35951 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.64■□□□□ 0.09
LdlrP35951 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LdlrP35951 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LdlrP35951 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LdlrP35951 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LdlrP35951 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.64■□□□□ 0.09
LdlrP35951 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LdlrP35951 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LdlrP35951 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LdlrP35951 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.64■□□□□ 0.09
LdlrP35951 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LdlrP35951 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LdlrP35951 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.64■□□□□ 0.09
LdlrP35951 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LdlrP35951 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
LdlrP35951 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LdlrP35951 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LdlrP35951 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LdlrP35951 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LdlrP35951 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LdlrP35951 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LdlrP35951 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LdlrP35951 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LdlrP35951 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
LdlrP35951 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LdlrP35951 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.63■□□□□ 0.09
LdlrP35951 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.63■□□□□ 0.09
LdlrP35951 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LdlrP35951 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LdlrP35951 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LdlrP35951 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
LdlrP35951 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.63■□□□□ 0.09
LdlrP35951 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
LdlrP35951 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LdlrP35951 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LdlrP35951 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LdlrP35951 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
LdlrP35951 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LdlrP35951 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LdlrP35951 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LdlrP35951 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
LdlrP35951 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
LdlrP35951 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LdlrP35951 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
LdlrP35951 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LdlrP35951 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LdlrP35951 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LdlrP35951 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LdlrP35951 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LdlrP35951 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LdlrP35951 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
LdlrP35951 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LdlrP35951 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.62■□□□□ 0.09
LdlrP35951 Gm24589-201ENSMUST00000116692 94 ntBASIC15.62■□□□□ 0.09
LdlrP35951 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.62■□□□□ 0.09
LdlrP35951 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LdlrP35951 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
LdlrP35951 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LdlrP35951 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LdlrP35951 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LdlrP35951 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.62■□□□□ 0.09
LdlrP35951 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LdlrP35951 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LdlrP35951 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LdlrP35951 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.62■□□□□ 0.09
LdlrP35951 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.62■□□□□ 0.09
LdlrP35951 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LdlrP35951 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.62■□□□□ 0.09
LdlrP35951 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LdlrP35951 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LdlrP35951 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LdlrP35951 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LdlrP35951 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms