Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a11P31650 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Slc6a11P31650 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a11P31650 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a11P31650 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Slc6a11P31650 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Slc6a11P31650 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Slc6a11P31650 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Slc6a11P31650 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Slc6a11P31650 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Slc6a11P31650 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Slc6a11P31650 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Slc6a11P31650 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Slc6a11P31650 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Slc6a11P31650 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Slc6a11P31650 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a11P31650 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a11P31650 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Slc6a11P31650 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a11P31650 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Slc6a11P31650 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Slc6a11P31650 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a11P31650 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a11P31650 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a11P31650 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a11P31650 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a11P31650 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a11P31650 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Slc6a11P31650 Mir770-201ENSMUST00000103252 94 ntBASIC14.91□□□□□ -0.02
Slc6a11P31650 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Slc6a11P31650 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a11P31650 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.91□□□□□ -0.02
Slc6a11P31650 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.91□□□□□ -0.02
Slc6a11P31650 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
Slc6a11P31650 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Slc6a11P31650 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a11P31650 Mir8098-201ENSMUST00000184011 137 ntBASIC14.91□□□□□ -0.02
Slc6a11P31650 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a11P31650 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Slc6a11P31650 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a11P31650 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a11P31650 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Slc6a11P31650 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.91□□□□□ -0.02
Slc6a11P31650 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a11P31650 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a11P31650 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a11P31650 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Slc6a11P31650 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a11P31650 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Slc6a11P31650 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Slc6a11P31650 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.9□□□□□ -0.02
Slc6a11P31650 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.9□□□□□ -0.02
Slc6a11P31650 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Slc6a11P31650 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Slc6a11P31650 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Slc6a11P31650 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Slc6a11P31650 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Slc6a11P31650 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms