Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.43■□□□□ 0.06
Srp54P14576 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Srp54P14576 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Srp54P14576 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Srp54P14576 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Srp54P14576 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Srp54P14576 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Srp54P14576 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Srp54P14576 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Srp54P14576 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Srp54P14576 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.43■□□□□ 0.06
Srp54P14576 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Srp54P14576 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.43■□□□□ 0.06
Srp54P14576 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Srp54P14576 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Srp54P14576 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.42■□□□□ 0.06
Srp54P14576 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.42■□□□□ 0.06
Srp54P14576 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Srp54P14576 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
Srp54P14576 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Srp54P14576 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Srp54P14576 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.42■□□□□ 0.06
Srp54P14576 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.42■□□□□ 0.06
Srp54P14576 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.42■□□□□ 0.06
Srp54P14576 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.42■□□□□ 0.06
Srp54P14576 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.42■□□□□ 0.06
Srp54P14576 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Srp54P14576 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Srp54P14576 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Srp54P14576 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Srp54P14576 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.41■□□□□ 0.06
Srp54P14576 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Srp54P14576 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Srp54P14576 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Srp54P14576 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Srp54P14576 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Srp54P14576 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.41■□□□□ 0.06
Srp54P14576 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Srp54P14576 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Srp54P14576 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Srp54P14576 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.41■□□□□ 0.06
Srp54P14576 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Srp54P14576 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Srp54P14576 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Srp54P14576 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.41■□□□□ 0.06
Srp54P14576 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.41■□□□□ 0.06
Srp54P14576 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Srp54P14576 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.41■□□□□ 0.06
Srp54P14576 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.41■□□□□ 0.06
Srp54P14576 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Srp54P14576 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.41■□□□□ 0.06
Srp54P14576 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.41■□□□□ 0.06
Srp54P14576 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.41■□□□□ 0.06
Srp54P14576 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.41■□□□□ 0.06
Srp54P14576 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.41■□□□□ 0.06
Srp54P14576 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.41■□□□□ 0.06
Srp54P14576 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Srp54P14576 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Srp54P14576 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Srp54P14576 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Srp54P14576 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Srp54P14576 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Srp54P14576 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Srp54P14576 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Srp54P14576 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Srp54P14576 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Srp54P14576 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Srp54P14576 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.4■□□□□ 0.06
Srp54P14576 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Srp54P14576 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Srp54P14576 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Srp54P14576 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.4■□□□□ 0.06
Srp54P14576 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Srp54P14576 Gm13036-201ENSMUST00000117799 748 ntBASIC15.4■□□□□ 0.06
Srp54P14576 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.4■□□□□ 0.06
Srp54P14576 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Srp54P14576 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Srp54P14576 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.4■□□□□ 0.06
Srp54P14576 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.4■□□□□ 0.06
Srp54P14576 Psmb5-202ENSMUST00000227257 622 ntBASIC15.4■□□□□ 0.06
Srp54P14576 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms