Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Ccl3P10855 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccl3P10855 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccl3P10855 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ccl3P10855 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ccl3P10855 Gm13216-201ENSMUST00000117145 591 ntBASIC13.83□□□□□ -0.2
Ccl3P10855 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.83□□□□□ -0.2
Ccl3P10855 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl3P10855 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.83□□□□□ -0.2
Ccl3P10855 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl3P10855 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ccl3P10855 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl3P10855 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl3P10855 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl3P10855 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl3P10855 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl3P10855 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ccl3P10855 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl3P10855 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccl3P10855 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccl3P10855 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ccl3P10855 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl3P10855 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl3P10855 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.82□□□□□ -0.2
Ccl3P10855 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl3P10855 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl3P10855 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl3P10855 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccl3P10855 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl3P10855 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl3P10855 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.82□□□□□ -0.2
Ccl3P10855 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl3P10855 Rprl2-201ENSMUST00000157150 290 ntBASIC13.82□□□□□ -0.2
Ccl3P10855 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccl3P10855 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.82□□□□□ -0.2
Ccl3P10855 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccl3P10855 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Ccl3P10855 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl3P10855 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccl3P10855 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl3P10855 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl3P10855 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Ccl3P10855 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ccl3P10855 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl3P10855 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl3P10855 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl3P10855 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl3P10855 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl3P10855 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl3P10855 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl3P10855 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccl3P10855 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Ccl3P10855 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ccl3P10855 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Ccl3P10855 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.81□□□□□ -0.2
Ccl3P10855 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Ccl3P10855 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Mir6990-201ENSMUST00000183724 91 ntBASIC13.81□□□□□ -0.2
Ccl3P10855 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Gm20553-201ENSMUST00000204205 844 ntBASIC13.81□□□□□ -0.2
Ccl3P10855 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ccl3P10855 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.81□□□□□ -0.2
Ccl3P10855 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccl3P10855 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccl3P10855 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.8□□□□□ -0.2
Ccl3P10855 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Ccl3P10855 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccl3P10855 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms