Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.25□□□□□ -0.45
Ccl1P10146 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccl1P10146 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccl1P10146 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl1P10146 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl1P10146 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl1P10146 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.24□□□□□ -0.45
Ccl1P10146 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl1P10146 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccl1P10146 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl1P10146 Gm12085-201ENSMUST00000119263 940 ntBASIC12.24□□□□□ -0.45
Ccl1P10146 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccl1P10146 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccl1P10146 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccl1P10146 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccl1P10146 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl1P10146 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.24□□□□□ -0.45
Ccl1P10146 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccl1P10146 Il3ra-202ENSMUST00000223589 738 ntBASIC12.24□□□□□ -0.45
Ccl1P10146 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl1P10146 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl1P10146 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl1P10146 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl1P10146 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccl1P10146 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Ccl1P10146 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccl1P10146 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.23□□□□□ -0.45
Ccl1P10146 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccl1P10146 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.23□□□□□ -0.45
Ccl1P10146 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.23□□□□□ -0.45
Ccl1P10146 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Ccl1P10146 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Gm10849-201ENSMUST00000100397 618 ntBASIC12.23□□□□□ -0.45
Ccl1P10146 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Ccl1P10146 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccl1P10146 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccl1P10146 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Ccl1P10146 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ccl1P10146 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ccl1P10146 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Ccl1P10146 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccl1P10146 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.22□□□□□ -0.45
Ccl1P10146 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccl1P10146 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ccl1P10146 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Ccl1P10146 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccl1P10146 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccl1P10146 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.22□□□□□ -0.45
Ccl1P10146 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms