Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim1P0C8K7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim1P0C8K7 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim1P0C8K7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim1P0C8K7 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim1P0C8K7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim1P0C8K7 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Smim1P0C8K7 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim1P0C8K7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC10.86□□□□□ -0.67
Smim1P0C8K7 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim1P0C8K7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim1P0C8K7 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Smim1P0C8K7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim1P0C8K7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim1P0C8K7 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Smim1P0C8K7 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Gm37025-201ENSMUST00000195159 829 ntBASIC10.85□□□□□ -0.67
Smim1P0C8K7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Gm10138-203ENSMUST00000206952 366 ntBASIC10.85□□□□□ -0.67
Smim1P0C8K7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 AC122901.1-201ENSMUST00000214203 1790 ntBASIC10.85□□□□□ -0.67
Smim1P0C8K7 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Smim1P0C8K7 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Actl10-202ENSMUST00000226583 1501 ntBASIC10.84□□□□□ -0.67
Smim1P0C8K7 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Smim1P0C8K7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Gm15375-201ENSMUST00000119510 849 ntBASIC10.84□□□□□ -0.67
Smim1P0C8K7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC10.84□□□□□ -0.67
Smim1P0C8K7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Smim1P0C8K7 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Smim1P0C8K7 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC10.83□□□□□ -0.67
Smim1P0C8K7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC10.83□□□□□ -0.68
Smim1P0C8K7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms