Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P04224 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
P04224 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
P04224 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.81□□□□□ -0.2
P04224 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.81□□□□□ -0.2
P04224 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
P04224 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P04224 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P04224 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P04224 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P04224 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P04224 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P04224 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P04224 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.81□□□□□ -0.2
P04224 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
P04224 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
P04224 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P04224 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
P04224 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
P04224 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
P04224 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P04224 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
P04224 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.8□□□□□ -0.2
P04224 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
P04224 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.8□□□□□ -0.2
P04224 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
P04224 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
P04224 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.8□□□□□ -0.2
P04224 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
P04224 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.8□□□□□ -0.2
P04224 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.8□□□□□ -0.2
P04224 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
P04224 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.8□□□□□ -0.2
P04224 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.8□□□□□ -0.2
P04224 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
P04224 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P04224 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
P04224 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
P04224 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
P04224 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P04224 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
P04224 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P04224 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
P04224 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
P04224 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
P04224 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P04224 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
P04224 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.79□□□□□ -0.2
P04224 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
P04224 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P04224 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P04224 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
P04224 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P04224 App-207ENSMUST00000227737 2827 ntBASIC13.79□□□□□ -0.2
P04224 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
P04224 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P04224 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
P04224 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
P04224 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
P04224 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
P04224 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.78□□□□□ -0.2
P04224 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
P04224 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
P04224 Mir1199-201ENSMUST00000117015 119 ntBASIC13.78□□□□□ -0.2
P04224 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
P04224 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
P04224 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
P04224 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms