Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CfdP03953 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CfdP03953 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CfdP03953 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CfdP03953 Gm12527-201ENSMUST00000117967 564 ntBASIC13.15□□□□□ -0.3
CfdP03953 Gm11336-201ENSMUST00000118168 334 ntBASIC13.15□□□□□ -0.3
CfdP03953 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CfdP03953 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.15□□□□□ -0.3
CfdP03953 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CfdP03953 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
CfdP03953 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CfdP03953 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.15□□□□□ -0.3
CfdP03953 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CfdP03953 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CfdP03953 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CfdP03953 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CfdP03953 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.15□□□□□ -0.3
CfdP03953 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CfdP03953 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CfdP03953 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
CfdP03953 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CfdP03953 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CfdP03953 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CfdP03953 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CfdP03953 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CfdP03953 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CfdP03953 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CfdP03953 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CfdP03953 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CfdP03953 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CfdP03953 Gm12441-201ENSMUST00000121806 588 ntBASIC13.14□□□□□ -0.31
CfdP03953 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CfdP03953 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CfdP03953 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CfdP03953 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CfdP03953 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CfdP03953 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CfdP03953 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CfdP03953 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CfdP03953 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CfdP03953 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CfdP03953 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CfdP03953 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CfdP03953 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CfdP03953 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CfdP03953 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.14□□□□□ -0.31
CfdP03953 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CfdP03953 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CfdP03953 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
CfdP03953 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CfdP03953 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.13□□□□□ -0.31
CfdP03953 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
CfdP03953 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.13□□□□□ -0.31
CfdP03953 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.13□□□□□ -0.31
CfdP03953 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.13□□□□□ -0.31
CfdP03953 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CfdP03953 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CfdP03953 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.13□□□□□ -0.31
CfdP03953 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
CfdP03953 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CfdP03953 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.13□□□□□ -0.31
CfdP03953 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.13□□□□□ -0.31
CfdP03953 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CfdP03953 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CfdP03953 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CfdP03953 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CfdP03953 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CfdP03953 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CfdP03953 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CfdP03953 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CfdP03953 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CfdP03953 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CfdP03953 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CfdP03953 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.12□□□□□ -0.31
CfdP03953 Gm7370-201ENSMUST00000219471 767 ntBASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms