Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa3P02831 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa3P02831 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa3P02831 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa3P02831 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.17□□□□□ -0.3
Hoxa3P02831 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa3P02831 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa3P02831 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa3P02831 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa3P02831 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa3P02831 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa3P02831 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa3P02831 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hoxa3P02831 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxa3P02831 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 Gm4459-201ENSMUST00000118750 468 ntBASIC13.16□□□□□ -0.3
Hoxa3P02831 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.16□□□□□ -0.3
Hoxa3P02831 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxa3P02831 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.16□□□□□ -0.3
Hoxa3P02831 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hoxa3P02831 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hoxa3P02831 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hoxa3P02831 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxa3P02831 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa3P02831 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa3P02831 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa3P02831 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Hoxa3P02831 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Hoxa3P02831 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa3P02831 Gm25990-201ENSMUST00000102440 86 ntBASIC13.15□□□□□ -0.3
Hoxa3P02831 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Hoxa3P02831 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.15□□□□□ -0.3
Hoxa3P02831 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.15□□□□□ -0.3
Hoxa3P02831 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.15□□□□□ -0.3
Hoxa3P02831 Gm4535-201ENSMUST00000182274 558 ntBASIC13.15□□□□□ -0.3
Hoxa3P02831 Gm27525-201ENSMUST00000184465 107 ntBASIC13.15□□□□□ -0.3
Hoxa3P02831 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.15□□□□□ -0.3
Hoxa3P02831 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.15□□□□□ -0.3
Hoxa3P02831 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa3P02831 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa3P02831 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Hoxa3P02831 Gm10355-201ENSMUST00000097146 517 ntBASIC13.15□□□□□ -0.3
Hoxa3P02831 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa3P02831 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa3P02831 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Hoxa3P02831 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa3P02831 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa3P02831 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa3P02831 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa3P02831 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.15□□□□□ -0.3
Hoxa3P02831 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hoxa3P02831 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxa3P02831 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Hoxa3P02831 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Hoxa3P02831 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hoxa3P02831 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hoxa3P02831 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Hoxa3P02831 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Gm8097-201ENSMUST00000117903 829 ntBASIC13.14□□□□□ -0.31
Hoxa3P02831 Gm12350-201ENSMUST00000121208 462 ntBASIC13.14□□□□□ -0.31
Hoxa3P02831 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.14□□□□□ -0.31
Hoxa3P02831 Mir6404-201ENSMUST00000183699 94 ntBASIC13.14□□□□□ -0.31
Hoxa3P02831 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.14□□□□□ -0.31
Hoxa3P02831 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.14□□□□□ -0.31
Hoxa3P02831 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.14□□□□□ -0.31
Hoxa3P02831 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.14□□□□□ -0.31
Hoxa3P02831 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxa3P02831 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms