Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Gm16061-201ENSMUST00000122167 857 ntBASIC13.28□□□□□ -0.28
Ifna1P01572 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.28□□□□□ -0.28
Ifna1P01572 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ifna1P01572 Mir5122-201ENSMUST00000175004 89 ntBASIC13.28□□□□□ -0.28
Ifna1P01572 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.28□□□□□ -0.28
Ifna1P01572 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.28□□□□□ -0.28
Ifna1P01572 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ifna1P01572 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ifna1P01572 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ifna1P01572 Gm10566-201ENSMUST00000086739 996 ntBASIC13.28□□□□□ -0.28
Ifna1P01572 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Ifna1P01572 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ifna1P01572 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ifna1P01572 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ifna1P01572 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Ifna1P01572 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.28□□□□□ -0.28
Ifna1P01572 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ifna1P01572 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ifna1P01572 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ifna1P01572 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ifna1P01572 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ifna1P01572 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ifna1P01572 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ifna1P01572 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ifna1P01572 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ifna1P01572 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ifna1P01572 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ifna1P01572 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ifna1P01572 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ifna1P01572 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ifna1P01572 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ifna1P01572 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ifna1P01572 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Ifna1P01572 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ifna1P01572 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Ifna1P01572 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ifna1P01572 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.27□□□□□ -0.28
Ifna1P01572 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ifna1P01572 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ifna1P01572 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.27□□□□□ -0.29
Ifna1P01572 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ifna1P01572 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ifna1P01572 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ifna1P01572 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Ifna1P01572 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ifna1P01572 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.27□□□□□ -0.29
Ifna1P01572 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ifna1P01572 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ifna1P01572 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ifna1P01572 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ifna1P01572 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ifna1P01572 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.27□□□□□ -0.29
Ifna1P01572 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ifna1P01572 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ifna1P01572 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ifna1P01572 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ifna1P01572 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ifna1P01572 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ifna1P01572 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ifna1P01572 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ifna1P01572 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ifna1P01572 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ifna1P01572 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ifna1P01572 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ifna1P01572 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.26□□□□□ -0.29
Ifna1P01572 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ifna1P01572 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Ifna1P01572 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.26□□□□□ -0.29
Ifna1P01572 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.26□□□□□ -0.29
Ifna1P01572 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Ifna1P01572 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ifna1P01572 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ifna1P01572 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ifna1P01572 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ifna1P01572 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.25□□□□□ -0.29
Ifna1P01572 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ifna1P01572 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ifna1P01572 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.25□□□□□ -0.29
Ifna1P01572 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.25□□□□□ -0.29
Ifna1P01572 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ifna1P01572 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms