Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CcnkO88874 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14□□□□□ -0.17
CcnkO88874 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CcnkO88874 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CcnkO88874 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14□□□□□ -0.17
CcnkO88874 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CcnkO88874 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14□□□□□ -0.17
CcnkO88874 Mir1668-201ENSMUST00000184114 107 ntBASIC14□□□□□ -0.17
CcnkO88874 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14□□□□□ -0.17
CcnkO88874 Gm18959-201ENSMUST00000208954 655 ntBASIC14□□□□□ -0.17
CcnkO88874 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CcnkO88874 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CcnkO88874 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14□□□□□ -0.17
CcnkO88874 Phf7-203ENSMUST00000226565 1971 ntBASIC14□□□□□ -0.17
CcnkO88874 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14□□□□□ -0.17
CcnkO88874 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CcnkO88874 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.99□□□□□ -0.17
CcnkO88874 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
CcnkO88874 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.99□□□□□ -0.17
CcnkO88874 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CcnkO88874 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CcnkO88874 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.99□□□□□ -0.17
CcnkO88874 Gm6433-201ENSMUST00000118634 875 ntBASIC13.99□□□□□ -0.17
CcnkO88874 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CcnkO88874 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.99□□□□□ -0.17
CcnkO88874 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CcnkO88874 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.99□□□□□ -0.17
CcnkO88874 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.99□□□□□ -0.17
CcnkO88874 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CcnkO88874 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.98□□□□□ -0.17
CcnkO88874 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CcnkO88874 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CcnkO88874 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CcnkO88874 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CcnkO88874 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CcnkO88874 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
CcnkO88874 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CcnkO88874 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CcnkO88874 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CcnkO88874 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CcnkO88874 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CcnkO88874 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CcnkO88874 Gm15565-201ENSMUST00000118890 427 ntBASIC13.98□□□□□ -0.17
CcnkO88874 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms