Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.54□□□□□ -0.08
Cops4O88544 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cops4O88544 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Cops4O88544 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.54□□□□□ -0.08
Cops4O88544 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.54□□□□□ -0.08
Cops4O88544 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.54□□□□□ -0.08
Cops4O88544 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cops4O88544 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cops4O88544 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.54□□□□□ -0.08
Cops4O88544 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.54□□□□□ -0.08
Cops4O88544 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cops4O88544 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Cops4O88544 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops4O88544 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cops4O88544 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops4O88544 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops4O88544 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cops4O88544 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops4O88544 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops4O88544 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Cops4O88544 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
Cops4O88544 Gm30025-201ENSMUST00000218555 728 ntBASIC14.53□□□□□ -0.08
Cops4O88544 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cops4O88544 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops4O88544 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops4O88544 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops4O88544 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops4O88544 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops4O88544 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops4O88544 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops4O88544 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cops4O88544 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Cops4O88544 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops4O88544 Phf7-203ENSMUST00000226565 1971 ntBASIC14.53□□□□□ -0.08
Cops4O88544 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cops4O88544 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops4O88544 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops4O88544 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Cops4O88544 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops4O88544 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops4O88544 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cops4O88544 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cops4O88544 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cops4O88544 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops4O88544 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops4O88544 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Cops4O88544 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.52□□□□□ -0.08
Cops4O88544 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops4O88544 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cops4O88544 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Cops4O88544 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops4O88544 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.52□□□□□ -0.09
Cops4O88544 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.52□□□□□ -0.09
Cops4O88544 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cops4O88544 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops4O88544 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Cops4O88544 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.52□□□□□ -0.09
Cops4O88544 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops4O88544 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops4O88544 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cops4O88544 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cops4O88544 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops4O88544 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops4O88544 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops4O88544 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops4O88544 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cops4O88544 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.51□□□□□ -0.09
Cops4O88544 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cops4O88544 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.51□□□□□ -0.09
Cops4O88544 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms