Protein–RNA interactions for Protein: O35874

Slc1a4, Neutral amino acid transporter A, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a4O35874 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a4O35874 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.43■□□□□ 0.54
Slc1a4O35874 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a4O35874 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a4O35874 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Slc1a4O35874 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Slc1a4O35874 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a4O35874 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a4O35874 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a4O35874 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a4O35874 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a4O35874 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slc1a4O35874 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a4O35874 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a4O35874 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a4O35874 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a4O35874 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a4O35874 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a4O35874 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a4O35874 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a4O35874 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a4O35874 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a4O35874 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.42■□□□□ 0.54
Slc1a4O35874 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Slc1a4O35874 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Slc1a4O35874 Gm6550-201ENSMUST00000187574 993 ntBASIC18.42■□□□□ 0.54
Slc1a4O35874 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.42■□□□□ 0.54
Slc1a4O35874 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a4O35874 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Slc1a4O35874 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.42■□□□□ 0.54
Slc1a4O35874 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a4O35874 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a4O35874 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Slc1a4O35874 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a4O35874 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a4O35874 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slc1a4O35874 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.42■□□□□ 0.54
Slc1a4O35874 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Slc1a4O35874 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc1a4O35874 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Slc1a4O35874 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc1a4O35874 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc1a4O35874 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.41■□□□□ 0.54
Slc1a4O35874 Gm27646-201ENSMUST00000183989 110 ntBASIC18.41■□□□□ 0.54
Slc1a4O35874 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc1a4O35874 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc1a4O35874 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc1a4O35874 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc1a4O35874 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc1a4O35874 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slc1a4O35874 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc1a4O35874 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc1a4O35874 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.41■□□□□ 0.54
Slc1a4O35874 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc1a4O35874 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc1a4O35874 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.41■□□□□ 0.54
Slc1a4O35874 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc1a4O35874 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc1a4O35874 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slc1a4O35874 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Slc1a4O35874 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a4O35874 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Slc1a4O35874 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a4O35874 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a4O35874 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a4O35874 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a4O35874 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a4O35874 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a4O35874 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Slc1a4O35874 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a4O35874 Gm12350-201ENSMUST00000121208 462 ntBASIC18.4■□□□□ 0.54
Slc1a4O35874 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.4■□□□□ 0.54
Slc1a4O35874 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.4■□□□□ 0.54
Slc1a4O35874 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a4O35874 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.4■□□□□ 0.54
Slc1a4O35874 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a4O35874 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.4■□□□□ 0.54
Slc1a4O35874 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.4■□□□□ 0.54
Slc1a4O35874 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a4O35874 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a4O35874 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a4O35874 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Slc1a4O35874 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.4■□□□□ 0.54
Slc1a4O35874 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a4O35874 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a4O35874 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a4O35874 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a4O35874 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slc1a4O35874 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Slc1a4O35874 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Slc1a4O35874 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Slc1a4O35874 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Slc1a4O35874 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc1a4O35874 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slc1a4O35874 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc1a4O35874 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slc1a4O35874 Gm7222-201ENSMUST00000117512 906 ntBASIC18.39■□□□□ 0.53
Slc1a4O35874 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Slc1a4O35874 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.39■□□□□ 0.53
Slc1a4O35874 Mir5126-201ENSMUST00000175513 77 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms