Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Phox2bO35690 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.77■□□□□ 0.12
Phox2bO35690 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.77■□□□□ 0.12
Phox2bO35690 Gm7653-201ENSMUST00000214567 508 ntBASIC15.77■□□□□ 0.12
Phox2bO35690 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.77■□□□□ 0.12
Phox2bO35690 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Phox2bO35690 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Phox2bO35690 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Phox2bO35690 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Phox2bO35690 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Phox2bO35690 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Phox2bO35690 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Phox2bO35690 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Phox2bO35690 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Phox2bO35690 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Phox2bO35690 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Phox2bO35690 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Phox2bO35690 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Phox2bO35690 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Phox2bO35690 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Phox2bO35690 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.76■□□□□ 0.11
Phox2bO35690 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Phox2bO35690 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
Phox2bO35690 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC15.76■□□□□ 0.11
Phox2bO35690 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Phox2bO35690 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Phox2bO35690 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Phox2bO35690 Gm43474-201ENSMUST00000196415 774 ntBASIC15.76■□□□□ 0.11
Phox2bO35690 Gm45167-201ENSMUST00000208007 322 ntBASIC15.76■□□□□ 0.11
Phox2bO35690 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Phox2bO35690 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Phox2bO35690 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Phox2bO35690 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Phox2bO35690 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Phox2bO35690 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Phox2bO35690 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Phox2bO35690 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Phox2bO35690 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Phox2bO35690 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Phox2bO35690 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.76■□□□□ 0.11
Phox2bO35690 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Phox2bO35690 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Phox2bO35690 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Phox2bO35690 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.75■□□□□ 0.11
Phox2bO35690 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Phox2bO35690 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Phox2bO35690 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Phox2bO35690 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Phox2bO35690 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Phox2bO35690 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Phox2bO35690 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.75■□□□□ 0.11
Phox2bO35690 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Phox2bO35690 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Phox2bO35690 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.75■□□□□ 0.11
Phox2bO35690 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Phox2bO35690 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.75■□□□□ 0.11
Phox2bO35690 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC15.75■□□□□ 0.11
Phox2bO35690 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Phox2bO35690 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Phox2bO35690 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Phox2bO35690 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.75■□□□□ 0.11
Phox2bO35690 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.75■□□□□ 0.11
Phox2bO35690 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Phox2bO35690 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Phox2bO35690 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.75■□□□□ 0.11
Phox2bO35690 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Phox2bO35690 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Phox2bO35690 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
Phox2bO35690 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.75■□□□□ 0.11
Phox2bO35690 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Phox2bO35690 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Phox2bO35690 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Phox2bO35690 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Phox2bO35690 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Phox2bO35690 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Phox2bO35690 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Phox2bO35690 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Phox2bO35690 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Phox2bO35690 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Phox2bO35690 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Phox2bO35690 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Phox2bO35690 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Phox2bO35690 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Phox2bO35690 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Phox2bO35690 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Phox2bO35690 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Phox2bO35690 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Phox2bO35690 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.74■□□□□ 0.11
Phox2bO35690 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.74■□□□□ 0.11
Phox2bO35690 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.74■□□□□ 0.11
Phox2bO35690 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Phox2bO35690 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.74■□□□□ 0.11
Phox2bO35690 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.74■□□□□ 0.11
Phox2bO35690 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.74■□□□□ 0.11
Phox2bO35690 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Phox2bO35690 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.74■□□□□ 0.11
Phox2bO35690 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.74■□□□□ 0.11
Phox2bO35690 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Phox2bO35690 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Phox2bO35690 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms