Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Alx4O35137 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Alx4O35137 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Alx4O35137 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Alx4O35137 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Alx4O35137 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Alx4O35137 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Alx4O35137 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Alx4O35137 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Alx4O35137 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Alx4O35137 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Alx4O35137 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Alx4O35137 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Alx4O35137 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Alx4O35137 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Alx4O35137 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx4O35137 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Alx4O35137 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.02□□□□□ -0.17
Alx4O35137 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Alx4O35137 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Alx4O35137 Gm27389-201ENSMUST00000183622 195 ntBASIC14.02□□□□□ -0.17
Alx4O35137 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.02□□□□□ -0.17
Alx4O35137 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx4O35137 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx4O35137 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Alx4O35137 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx4O35137 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Alx4O35137 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx4O35137 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx4O35137 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Alx4O35137 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Alx4O35137 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx4O35137 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx4O35137 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx4O35137 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx4O35137 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx4O35137 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Alx4O35137 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Alx4O35137 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Alx4O35137 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Alx4O35137 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.01□□□□□ -0.17
Alx4O35137 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx4O35137 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.01□□□□□ -0.17
Alx4O35137 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx4O35137 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx4O35137 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Alx4O35137 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Alx4O35137 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx4O35137 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Alx4O35137 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Alx4O35137 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Alx4O35137 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Alx4O35137 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
Alx4O35137 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx4O35137 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx4O35137 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx4O35137 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx4O35137 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx4O35137 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx4O35137 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Alx4O35137 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Alx4O35137 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx4O35137 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx4O35137 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14□□□□□ -0.17
Alx4O35137 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14□□□□□ -0.17
Alx4O35137 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx4O35137 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14□□□□□ -0.17
Alx4O35137 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx4O35137 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14□□□□□ -0.17
Alx4O35137 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx4O35137 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14□□□□□ -0.17
Alx4O35137 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx4O35137 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Alx4O35137 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Alx4O35137 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14□□□□□ -0.17
Alx4O35137 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Alx4O35137 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Alx4O35137 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14□□□□□ -0.17
Alx4O35137 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx4O35137 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Alx4O35137 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14□□□□□ -0.17
Alx4O35137 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx4O35137 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Alx4O35137 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Alx4O35137 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.99□□□□□ -0.17
Alx4O35137 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Alx4O35137 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Alx4O35137 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx4O35137 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx4O35137 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Alx4O35137 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Alx4O35137 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx4O35137 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx4O35137 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.99□□□□□ -0.17
Alx4O35137 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx4O35137 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.99□□□□□ -0.17
Alx4O35137 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.99□□□□□ -0.17
Alx4O35137 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx4O35137 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Alx4O35137 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms