Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Gm7901-201ENSMUST00000120430 1597 ntBASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Gm11543-201ENSMUST00000120758 370 ntBASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Gm15321-201ENSMUST00000121290 288 ntBASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Gm28630-201ENSMUST00000187806 498 ntBASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Gm7775-201ENSMUST00000218871 853 ntBASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc85cE9Q6B2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC19.27■□□□□ 0.68
Ccdc85cE9Q6B2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc85cE9Q6B2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc85cE9Q6B2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc85cE9Q6B2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Ccdc85cE9Q6B2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc85cE9Q6B2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc85cE9Q6B2 Gm29541-201ENSMUST00000191351 678 ntBASIC19.27■□□□□ 0.68
Ccdc85cE9Q6B2 Ighv5-13-201ENSMUST00000193550 290 ntBASIC19.27■□□□□ 0.68
Ccdc85cE9Q6B2 Gm9908-201ENSMUST00000211534 448 ntBASIC19.27■□□□□ 0.68
Ccdc85cE9Q6B2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc85cE9Q6B2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc85cE9Q6B2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc85cE9Q6B2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Ccdc85cE9Q6B2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc85cE9Q6B2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc85cE9Q6B2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc85cE9Q6B2 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc85cE9Q6B2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc85cE9Q6B2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc85cE9Q6B2 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc85cE9Q6B2 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc85cE9Q6B2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc85cE9Q6B2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc85cE9Q6B2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc85cE9Q6B2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc85cE9Q6B2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc85cE9Q6B2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc85cE9Q6B2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ccdc85cE9Q6B2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc85cE9Q6B2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc85cE9Q6B2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.25■□□□□ 0.67
Ccdc85cE9Q6B2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc85cE9Q6B2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc85cE9Q6B2 Gm6539-201ENSMUST00000119157 1064 ntBASIC19.25■□□□□ 0.67
Ccdc85cE9Q6B2 Gm12091-201ENSMUST00000146791 830 ntBASIC19.25■□□□□ 0.67
Ccdc85cE9Q6B2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC19.25■□□□□ 0.67
Ccdc85cE9Q6B2 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc85cE9Q6B2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC19.25■□□□□ 0.67
Ccdc85cE9Q6B2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC19.25■□□□□ 0.67
Ccdc85cE9Q6B2 Gm6266-201ENSMUST00000203844 806 ntBASIC19.25■□□□□ 0.67
Ccdc85cE9Q6B2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc85cE9Q6B2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc85cE9Q6B2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC19.25■□□□□ 0.67
Ccdc85cE9Q6B2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc85cE9Q6B2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc85cE9Q6B2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ccdc85cE9Q6B2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc85cE9Q6B2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc85cE9Q6B2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc85cE9Q6B2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Ccdc85cE9Q6B2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc85cE9Q6B2 Gm18737-201ENSMUST00000173594 937 ntBASIC19.24■□□□□ 0.67
Ccdc85cE9Q6B2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc85cE9Q6B2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc85cE9Q6B2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc85cE9Q6B2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc85cE9Q6B2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc85cE9Q6B2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc85cE9Q6B2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc85cE9Q6B2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc85cE9Q6B2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.23■□□□□ 0.67
Ccdc85cE9Q6B2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc85cE9Q6B2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc85cE9Q6B2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc85cE9Q6B2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC19.23■□□□□ 0.67
Ccdc85cE9Q6B2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc85cE9Q6B2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc85cE9Q6B2 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms