Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tmf1B9EKI3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tmf1B9EKI3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Tmf1B9EKI3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tmf1B9EKI3 Gm11185-201ENSMUST00000117732 1007 ntBASIC21.21■□□□□ 0.99
Tmf1B9EKI3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC21.21■□□□□ 0.99
Tmf1B9EKI3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC21.21■□□□□ 0.99
Tmf1B9EKI3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC21.21■□□□□ 0.99
Tmf1B9EKI3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Tmf1B9EKI3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tmf1B9EKI3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Tmf1B9EKI3 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Tmf1B9EKI3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tmf1B9EKI3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Tmf1B9EKI3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tmf1B9EKI3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Tmf1B9EKI3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tmf1B9EKI3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tmf1B9EKI3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Tmf1B9EKI3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Tmf1B9EKI3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tmf1B9EKI3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 Gm7286-201ENSMUST00000182691 1007 ntBASIC21.19■□□□□ 0.98
Tmf1B9EKI3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 AC159093.1-201ENSMUST00000227779 380 ntBASIC21.19■□□□□ 0.98
Tmf1B9EKI3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tmf1B9EKI3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Gm27628-201ENSMUST00000184911 107 ntBASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tmf1B9EKI3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tmf1B9EKI3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tmf1B9EKI3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tmf1B9EKI3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tmf1B9EKI3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tmf1B9EKI3 Gm14722-201ENSMUST00000118943 689 ntBASIC21.17■□□□□ 0.98
Tmf1B9EKI3 Gm1401-201ENSMUST00000122048 772 ntBASIC21.17■□□□□ 0.98
Tmf1B9EKI3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms