Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Krt28A6BLY7 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Krt28A6BLY7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Krt28A6BLY7 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.37■□□□□ 0.37
Krt28A6BLY7 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt28A6BLY7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt28A6BLY7 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt28A6BLY7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Krt28A6BLY7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt28A6BLY7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt28A6BLY7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt28A6BLY7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Krt28A6BLY7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Krt28A6BLY7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.36■□□□□ 0.37
Krt28A6BLY7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Krt28A6BLY7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Krt28A6BLY7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Krt28A6BLY7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.36■□□□□ 0.37
Krt28A6BLY7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Krt28A6BLY7 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Krt28A6BLY7 Gm2272-201ENSMUST00000194903 582 ntBASIC17.36■□□□□ 0.37
Krt28A6BLY7 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Krt28A6BLY7 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.36■□□□□ 0.37
Krt28A6BLY7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Krt28A6BLY7 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Krt28A6BLY7 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Krt28A6BLY7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Krt28A6BLY7 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Krt28A6BLY7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Krt28A6BLY7 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Krt28A6BLY7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Krt28A6BLY7 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.36■□□□□ 0.37
Krt28A6BLY7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Krt28A6BLY7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Krt28A6BLY7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Krt28A6BLY7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Krt28A6BLY7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Krt28A6BLY7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Krt28A6BLY7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Krt28A6BLY7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Krt28A6BLY7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Krt28A6BLY7 Mir8102-201ENSMUST00000184148 139 ntBASIC17.35■□□□□ 0.37
Krt28A6BLY7 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Krt28A6BLY7 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.35■□□□□ 0.37
Krt28A6BLY7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Krt28A6BLY7 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Krt28A6BLY7 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Krt28A6BLY7 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Krt28A6BLY7 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Krt28A6BLY7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Krt28A6BLY7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.35■□□□□ 0.37
Krt28A6BLY7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Krt28A6BLY7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Krt28A6BLY7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.34■□□□□ 0.37
Krt28A6BLY7 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.34■□□□□ 0.37
Krt28A6BLY7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Krt28A6BLY7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Krt28A6BLY7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.33■□□□□ 0.37
Krt28A6BLY7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Krt28A6BLY7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Krt28A6BLY7 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Krt28A6BLY7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt28A6BLY7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt28A6BLY7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt28A6BLY7 Gm14127-201ENSMUST00000117906 678 ntBASIC17.33■□□□□ 0.36
Krt28A6BLY7 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Krt28A6BLY7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.33■□□□□ 0.36
Krt28A6BLY7 Gm27989-201ENSMUST00000184721 107 ntBASIC17.33■□□□□ 0.36
Krt28A6BLY7 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Krt28A6BLY7 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.33■□□□□ 0.36
Krt28A6BLY7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.33■□□□□ 0.36
Krt28A6BLY7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt28A6BLY7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt28A6BLY7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt28A6BLY7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Krt28A6BLY7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Krt28A6BLY7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Krt28A6BLY7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Krt28A6BLY7 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms