Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Mir5130-201ENSMUST00000175160 84 ntBASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12d-1A0N8R0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12d-1A0N8R0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav12d-1A0N8R0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Trav12d-1A0N8R0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav12d-1A0N8R0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav12d-1A0N8R0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Gm22240-201ENSMUST00000175225 82 ntBASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Gm27011-201ENSMUST00000182352 972 ntBASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Gm37722-201ENSMUST00000193757 208 ntBASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12d-1A0N8R0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12d-1A0N8R0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms