Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 Gm18246-201ENSMUST00000221023 728 ntBASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28729A0A1B0GSW2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28729A0A1B0GSW2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Gm28729A0A1B0GSW2 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28729A0A1B0GSW2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28729A0A1B0GSW2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28729A0A1B0GSW2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28729A0A1B0GSW2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28729A0A1B0GSW2 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.27■□□□□ 0.04
Gm28729A0A1B0GSW2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28729A0A1B0GSW2 Gm14701-201ENSMUST00000117156 348 ntBASIC15.27■□□□□ 0.04
Gm28729A0A1B0GSW2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Gm28729A0A1B0GSW2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28729A0A1B0GSW2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28729A0A1B0GSW2 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.27■□□□□ 0.04
Gm28729A0A1B0GSW2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.27■□□□□ 0.04
Gm28729A0A1B0GSW2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28729A0A1B0GSW2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Gm28729A0A1B0GSW2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm28729A0A1B0GSW2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gm28729A0A1B0GSW2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm28729A0A1B0GSW2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
Gm28729A0A1B0GSW2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Gm28729A0A1B0GSW2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm28729A0A1B0GSW2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gm28729A0A1B0GSW2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm28729A0A1B0GSW2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm28729A0A1B0GSW2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.27■□□□□ 0.03
Gm28729A0A1B0GSW2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Gm28729A0A1B0GSW2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Auts2-212ENSMUST00000178555 309 ntBASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Gm28729A0A1B0GSW2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms