Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trbv17A0A140T8P8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Gm15794-201ENSMUST00000120182 631 ntBASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Olfr129-201ENSMUST00000122318 993 ntBASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trbv17A0A140T8P8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trbv17A0A140T8P8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 Gm21362-201ENSMUST00000194272 928 ntBASIC12.04□□□□□ -0.48
Trbv17A0A140T8P8 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms