Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm8825-201ENSMUST00000182565 998 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm4518-201ENSMUST00000182638 718 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Gm10819-201ENSMUST00000099988 561 ntBASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-4A0A075B6B4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Trav6-4A0A075B6B4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav6-4A0A075B6B4 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms