Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav18A0A075B656 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav18A0A075B656 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trav18A0A075B656 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav18A0A075B656 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav18A0A075B656 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav18A0A075B656 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Gm10013-201ENSMUST00000106074 672 ntBASIC12.88□□□□□ -0.35
Trav18A0A075B656 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Gm6623-201ENSMUST00000173570 544 ntBASIC12.88□□□□□ -0.35
Trav18A0A075B656 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav18A0A075B656 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms