Protein–RNA interactions for Protein: A0A075B647

Trav9-2, T cell receptor alpha variable 9-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-2A0A075B647 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Trav9-2A0A075B647 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-2A0A075B647 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-2A0A075B647 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-2A0A075B647 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-2A0A075B647 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-2A0A075B647 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-2A0A075B647 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-2A0A075B647 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav9-2A0A075B647 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-2A0A075B647 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-2A0A075B647 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-2A0A075B647 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-2A0A075B647 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.81□□□□□ -0.52
Trav9-2A0A075B647 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Trav9-2A0A075B647 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9-2A0A075B647 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav9-2A0A075B647 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-2A0A075B647 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Gm6257-201ENSMUST00000163864 910 ntBASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Gm9172-201ENSMUST00000212092 954 ntBASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.79□□□□□ -0.52
Trav9-2A0A075B647 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-2A0A075B647 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms