Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm37153-201ENSMUST00000193637 231 ntBASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav5-1A0A075B5Z7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm18206-201ENSMUST00000207027 926 ntBASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav5-1A0A075B5Z7 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm13036-201ENSMUST00000117799 748 ntBASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm1401-201ENSMUST00000122048 772 ntBASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Gm15590-201ENSMUST00000078419 552 ntBASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav5-1A0A075B5Z7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5-1A0A075B5Z7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5-1A0A075B5Z7 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5-1A0A075B5Z7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5-1A0A075B5Z7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5-1A0A075B5Z7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5-1A0A075B5Z7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav5-1A0A075B5Z7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms