Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
H2afb3S4R1G7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Gm10252-201ENSMUST00000209541 832 ntBASIC14.18□□□□□ -0.14
H2afb3S4R1G7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
H2afb3S4R1G7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Gm10013-201ENSMUST00000106074 672 ntBASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Gm18032-201ENSMUST00000222541 538 ntBASIC14.17□□□□□ -0.14
H2afb3S4R1G7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
H2afb3S4R1G7 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
H2afb3S4R1G7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms