Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 Gm7774-201ENSMUST00000200064 533 ntBASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 Gm6018-201ENSMUST00000216090 1306 ntBASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Hdac6Q9Z2V5 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Hdac6Q9Z2V5 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hdac6Q9Z2V5 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hdac6Q9Z2V5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Gm13216-201ENSMUST00000117145 591 ntBASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Hdac6Q9Z2V5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hdac6Q9Z2V5 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac6Q9Z2V5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac6Q9Z2V5 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac6Q9Z2V5 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac6Q9Z2V5 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC19.62■□□□□ 0.73
Hdac6Q9Z2V5 Gm10253-201ENSMUST00000194270 940 ntBASIC19.62■□□□□ 0.73
Hdac6Q9Z2V5 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.62■□□□□ 0.73
Hdac6Q9Z2V5 AC126408.1-201ENSMUST00000225184 523 ntBASIC19.62■□□□□ 0.73
Hdac6Q9Z2V5 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Hdac6Q9Z2V5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac6Q9Z2V5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac6Q9Z2V5 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac6Q9Z2V5 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.62■□□□□ 0.73
Hdac6Q9Z2V5 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hdac6Q9Z2V5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac6Q9Z2V5 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac6Q9Z2V5 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Hdac6Q9Z2V5 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.61■□□□□ 0.73
Hdac6Q9Z2V5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac6Q9Z2V5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac6Q9Z2V5 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac6Q9Z2V5 Gm7336-201ENSMUST00000107041 1232 ntBASIC19.61■□□□□ 0.73
Hdac6Q9Z2V5 Gm27622-201ENSMUST00000183779 60 ntBASIC19.61■□□□□ 0.73
Hdac6Q9Z2V5 Gm27430-201ENSMUST00000184585 107 ntBASIC19.61■□□□□ 0.73
Hdac6Q9Z2V5 Gm44333-201ENSMUST00000197168 107 ntBASIC19.61■□□□□ 0.73
Hdac6Q9Z2V5 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC19.61■□□□□ 0.73
Hdac6Q9Z2V5 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hdac6Q9Z2V5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms