Protein–RNA interactions for Protein: Q9Z1X9

Cdc45, Cell division control protein 45 homolog, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc45Q9Z1X9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cdc45Q9Z1X9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Cdc45Q9Z1X9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdc45Q9Z1X9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdc45Q9Z1X9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Cdc45Q9Z1X9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdc45Q9Z1X9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdc45Q9Z1X9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdc45Q9Z1X9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdc45Q9Z1X9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 App-207ENSMUST00000227737 2827 ntBASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Gm28033-201ENSMUST00000184224 96 ntBASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdc45Q9Z1X9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdc45Q9Z1X9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdc45Q9Z1X9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdc45Q9Z1X9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdc45Q9Z1X9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdc45Q9Z1X9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
Cdc45Q9Z1X9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdc45Q9Z1X9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.31■□□□□ 0.52
Cdc45Q9Z1X9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.31■□□□□ 0.52
Cdc45Q9Z1X9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdc45Q9Z1X9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdc45Q9Z1X9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cdc45Q9Z1X9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdc45Q9Z1X9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdc45Q9Z1X9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdc45Q9Z1X9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdc45Q9Z1X9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdc45Q9Z1X9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdc45Q9Z1X9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdc45Q9Z1X9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cdc45Q9Z1X9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdc45Q9Z1X9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdc45Q9Z1X9 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdc45Q9Z1X9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdc45Q9Z1X9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdc45Q9Z1X9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cdc45Q9Z1X9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Cdc45Q9Z1X9 Gm9103-201ENSMUST00000119371 405 ntBASIC18.29■□□□□ 0.52
Cdc45Q9Z1X9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdc45Q9Z1X9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.29■□□□□ 0.52
Cdc45Q9Z1X9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdc45Q9Z1X9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdc45Q9Z1X9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdc45Q9Z1X9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdc45Q9Z1X9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdc45Q9Z1X9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms