Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Cpsf1Q9EPU4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC21.57■■□□□ 1.04
Cpsf1Q9EPU4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cpsf1Q9EPU4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Cpsf1Q9EPU4 Dancr-204ENSMUST00000132389 2347 ntBASIC21.56■■□□□ 1.04
Cpsf1Q9EPU4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf1Q9EPU4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf1Q9EPU4 Gm4913-201ENSMUST00000117075 1290 ntBASIC21.56■■□□□ 1.04
Cpsf1Q9EPU4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf1Q9EPU4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf1Q9EPU4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf1Q9EPU4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Cpsf1Q9EPU4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf1Q9EPU4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
Cpsf1Q9EPU4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf1Q9EPU4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
Cpsf1Q9EPU4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf1Q9EPU4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf1Q9EPU4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf1Q9EPU4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Cpsf1Q9EPU4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 CT009510.1-201ENSMUST00000227972 270 ntBASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Gm5648-201ENSMUST00000122244 1587 ntBASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Gm45747-201ENSMUST00000212203 999 ntBASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Cpsf1Q9EPU4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cpsf1Q9EPU4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cpsf1Q9EPU4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cpsf1Q9EPU4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC21.54■■□□□ 1.04
Cpsf1Q9EPU4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cpsf1Q9EPU4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cpsf1Q9EPU4 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC21.54■■□□□ 1.04
Cpsf1Q9EPU4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cpsf1Q9EPU4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cpsf1Q9EPU4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cpsf1Q9EPU4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf1Q9EPU4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.53■■□□□ 1.04
Cpsf1Q9EPU4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC21.53■■□□□ 1.04
Cpsf1Q9EPU4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC21.53■■□□□ 1.04
Cpsf1Q9EPU4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf1Q9EPU4 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf1Q9EPU4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf1Q9EPU4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf1Q9EPU4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf1Q9EPU4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf1Q9EPU4 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf1Q9EPU4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC21.53■■□□□ 1.04
Cpsf1Q9EPU4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf1Q9EPU4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC21.53■■□□□ 1.04
Cpsf1Q9EPU4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf1Q9EPU4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf1Q9EPU4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf1Q9EPU4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf1Q9EPU4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf1Q9EPU4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf1Q9EPU4 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Cpsf1Q9EPU4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf1Q9EPU4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf1Q9EPU4 Gm44616-201ENSMUST00000206417 1732 ntBASIC21.52■■□□□ 1.04
Cpsf1Q9EPU4 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf1Q9EPU4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf1Q9EPU4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf1Q9EPU4 Gm12008-201ENSMUST00000117791 755 ntBASIC21.52■■□□□ 1.04
Cpsf1Q9EPU4 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC21.52■■□□□ 1.04
Cpsf1Q9EPU4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Cpsf1Q9EPU4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Cpsf1Q9EPU4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf1Q9EPU4 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf1Q9EPU4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf1Q9EPU4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.52■■□□□ 1.03
Cpsf1Q9EPU4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Cpsf1Q9EPU4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Cpsf1Q9EPU4 Gm29361-201ENSMUST00000183323 2000 ntBASIC21.51■■□□□ 1.03
Cpsf1Q9EPU4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Cpsf1Q9EPU4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cpsf1Q9EPU4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cpsf1Q9EPU4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Cpsf1Q9EPU4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms