Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2aQ9DB34 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2aQ9DB34 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chmp2aQ9DB34 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Gm7153-201ENSMUST00000117092 455 ntBASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Gm25406-201ENSMUST00000157599 105 ntBASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Chmp2aQ9DB34 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Chmp2aQ9DB34 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Gm27741-201ENSMUST00000185060 237 ntBASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Birc2-201ENSMUST00000054878 378 ntBASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Chmp2aQ9DB34 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Chmp2aQ9DB34 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms