Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 AC093926.2-201ENSMUST00000214468 1228 ntBASIC20.68■□□□□ 0.9
U2af1Q9D883 Gm15590-201ENSMUST00000078419 552 ntBASIC20.68■□□□□ 0.9
U2af1Q9D883 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1Q9D883 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1Q9D883 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1Q9D883 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1Q9D883 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1Q9D883 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1Q9D883 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1Q9D883 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
U2af1Q9D883 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
U2af1Q9D883 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2af1Q9D883 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC20.67■□□□□ 0.9
U2af1Q9D883 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2af1Q9D883 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2af1Q9D883 Gm7222-201ENSMUST00000117512 906 ntBASIC20.67■□□□□ 0.9
U2af1Q9D883 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
U2af1Q9D883 Gm19164-201ENSMUST00000210667 640 ntBASIC20.67■□□□□ 0.9
U2af1Q9D883 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2af1Q9D883 AC153526.5-201ENSMUST00000218661 2147 ntBASIC20.67■□□□□ 0.9
U2af1Q9D883 AV026068-213ENSMUST00000223675 1171 ntBASIC20.67■□□□□ 0.9
U2af1Q9D883 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
U2af1Q9D883 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
U2af1Q9D883 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2af1Q9D883 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
U2af1Q9D883 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC20.67■□□□□ 0.9
U2af1Q9D883 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
U2af1Q9D883 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.67■□□□□ 0.9
U2af1Q9D883 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
U2af1Q9D883 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
U2af1Q9D883 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
U2af1Q9D883 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
U2af1Q9D883 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
U2af1Q9D883 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
U2af1Q9D883 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
U2af1Q9D883 AC127302.2-201ENSMUST00000215212 268 ntBASIC20.66■□□□□ 0.9
U2af1Q9D883 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
U2af1Q9D883 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
U2af1Q9D883 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
U2af1Q9D883 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1Q9D883 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1Q9D883 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1Q9D883 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1Q9D883 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
U2af1Q9D883 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1Q9D883 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.65■□□□□ 0.9
U2af1Q9D883 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
U2af1Q9D883 Gm15358-201ENSMUST00000119249 520 ntBASIC20.65■□□□□ 0.9
U2af1Q9D883 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1Q9D883 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1Q9D883 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1Q9D883 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1Q9D883 AW822252-206ENSMUST00000208904 237 ntBASIC20.65■□□□□ 0.9
U2af1Q9D883 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1Q9D883 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1Q9D883 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1Q9D883 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1Q9D883 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1Q9D883 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1Q9D883 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1Q9D883 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
U2af1Q9D883 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
U2af1Q9D883 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
U2af1Q9D883 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
U2af1Q9D883 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
U2af1Q9D883 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
U2af1Q9D883 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
U2af1Q9D883 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC20.64■□□□□ 0.9
U2af1Q9D883 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
U2af1Q9D883 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC20.64■□□□□ 0.89
U2af1Q9D883 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.64■□□□□ 0.89
U2af1Q9D883 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
U2af1Q9D883 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
U2af1Q9D883 Gm5682-201ENSMUST00000173402 505 ntBASIC20.64■□□□□ 0.89
U2af1Q9D883 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
U2af1Q9D883 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.64■□□□□ 0.89
U2af1Q9D883 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
U2af1Q9D883 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
U2af1Q9D883 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
U2af1Q9D883 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
U2af1Q9D883 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
U2af1Q9D883 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
U2af1Q9D883 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
U2af1Q9D883 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1Q9D883 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1Q9D883 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1Q9D883 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1Q9D883 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1Q9D883 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1Q9D883 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.63■□□□□ 0.89
U2af1Q9D883 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1Q9D883 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1Q9D883 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1Q9D883 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
U2af1Q9D883 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1Q9D883 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1Q9D883 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1Q9D883 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
U2af1Q9D883 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
U2af1Q9D883 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms