Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc3Q9CWU5 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc3Q9CWU5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc3Q9CWU5 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Khdc3Q9CWU5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc3Q9CWU5 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Khdc3Q9CWU5 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc3Q9CWU5 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc3Q9CWU5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc3Q9CWU5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Gm13312-201ENSMUST00000119631 718 ntBASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc3Q9CWU5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Mir6404-201ENSMUST00000183699 94 ntBASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Khdc3Q9CWU5 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Gm14859-201ENSMUST00000117752 357 ntBASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Khdc3Q9CWU5 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms