Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Gm42545-201ENSMUST00000202755 922 ntBASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RTRAFQ9CQE8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RTRAFQ9CQE8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RTRAFQ9CQE8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
RTRAFQ9CQE8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.83□□□□□ -0.35
RTRAFQ9CQE8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
RTRAFQ9CQE8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
RTRAFQ9CQE8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RTRAFQ9CQE8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Dio3-201ENSMUST00000097228 1449 ntBASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Gm13158-201ENSMUST00000122007 736 ntBASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RTRAFQ9CQE8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RTRAFQ9CQE8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms