Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Gm7284-201ENSMUST00000131667 944 ntBASIC15.42■□□□□ 0.06
Trim16Q99PP9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Trim16Q99PP9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Gm27704-201ENSMUST00000185094 107 ntBASIC15.42■□□□□ 0.06
Trim16Q99PP9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim16Q99PP9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.42■□□□□ 0.06
Trim16Q99PP9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim16Q99PP9 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.41■□□□□ 0.06
Trim16Q99PP9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Gm15794-201ENSMUST00000120182 631 ntBASIC15.41■□□□□ 0.06
Trim16Q99PP9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim16Q99PP9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trim16Q99PP9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim16Q99PP9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim16Q99PP9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim16Q99PP9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim16Q99PP9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.4■□□□□ 0.06
Trim16Q99PP9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim16Q99PP9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.4■□□□□ 0.06
Trim16Q99PP9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim16Q99PP9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim16Q99PP9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim16Q99PP9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim16Q99PP9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trim16Q99PP9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim16Q99PP9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim16Q99PP9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim16Q99PP9 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trim16Q99PP9 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim16Q99PP9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.4■□□□□ 0.06
Trim16Q99PP9 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trim16Q99PP9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
Trim16Q99PP9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim16Q99PP9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim16Q99PP9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim16Q99PP9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim16Q99PP9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim16Q99PP9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim16Q99PP9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim16Q99PP9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trim16Q99PP9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim16Q99PP9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim16Q99PP9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim16Q99PP9 Gm10052-201ENSMUST00000168019 960 ntBASIC15.39■□□□□ 0.05
Trim16Q99PP9 Gm36967-201ENSMUST00000193814 266 ntBASIC15.39■□□□□ 0.05
Trim16Q99PP9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms